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Genome Structure Analysis

 

  • Wang Y, Leung FC. In silico prediction of two classes of honeybee genes with CpG deficiency or CpG enrichment and sorting according to gene ontology classes. J Mol Evol. 2009 Jun;68(6):700-5. doi: 10.1007/s00239-009-9244-3. Epub 2009 May 23. PMID:19466376

  • Wang Y, Leung FC. Discovery of a long inverted repeat in human POTE genes. Genomics. 2009 Oct;94(4):278-83. doi: 10.1016/j.ygeno.2009.05.005. Epub 2009 May 20. PMID:19463943

  • Ng WC, Chan MN, Slingsby G, Williams GA, Leung FC. Isolation and characterization of microsatellite markers from the limpet Cellana grata. Mol Ecol Resour. 2009 May;9(3):902-4. doi: 10.1111/j.1755-0998.2008.02418.x. Epub 2009 Feb 11. PMID:21564784

  • Wang Y, Leung FC. Comparative genomic study reveals a transition from TA richness in invertebrates to GC richness in vertebrates at CpG flanking sites: an indication for context-dependent mutagenicity of methylated CpG sites. Genomics Proteomics Bioinformatics. 2008 Dec;6(3-4):144-54. doi: 10.1016/S1672-0229(09)60002-4. PMID:19329065

  • Wang Y, Leung FC. Acquisition of inverted GSTM exons by an intron of primate GSTM5 gene. J Hum Genet. 2009 May;54(5):271-6. doi: 10.1038/jhg.2009.23. Epub 2009 Mar 20. PMID:19300457

  • Wang Y, Leung FC. A study on genomic distribution and sequence features of human long inverted repeats reveals species-specific intronic inverted repeats. FEBS J. 2009 Apr;276(7):1986-98. doi: 10.1111/j.1742-4658.2009.06930.x. Epub 2009 Feb 25. PMID:19243432

  • Wang Y, Leung FC. GC content increased at CpG flanking positions of fish genes compared with sea squirt orthologs as a mechanism for reducing impact of DNA methylation. PLoS One. 2008;3(11):e3612. doi: 10.1371/journal.pone.0003612. Epub 2008 Nov 13. PMID:19005573

  • Wang Y, Fong PY, Leung FC, Mak W, Sham PC. Increased gene coverage and Alu frequency in large linkage disequilibrium blocks of the human genome. Genet Mol Res. 2007 Dec 11;6(4):1131-41. PMID:18273807

  • Wang Y, Zeng F, Hon CC, Zhang Y, Leung FC. The mitochondrial genome of the Basidiomycete fungus Pleurotus ostreatus (oyster mushroom). FEMS Microbiol Lett. 2008 Mar;280(1):34-41. doi: 10.1111/j.1574-6968.2007.01048.x. Epub 2008 Jan 31. PMID:18248422

  • Wang CY, Leung FC. Description of a synteny on the chicken chromosome zp23-22. Poult Sci. 2007 Mar;86(3):453-9. PMID:17297156

  • Li J, Wang X, Leung FC. The intragenomic polymorphism of a partially inverted repeat (PIR) in Gallus gallus domesticus, potential role of inverted repeats in satellite DNAs evolution. Gene. 2007 Jan 31;387(1-2):118-25. Epub 2006 Oct 5. PMID:17113248

  • Wang Y, Wang Z, Li J, Wang Y, Leung FC. Database for chicken full-length cDNAs. Physiol Genomics. 2007 Jan 17;28(2):141-5. Epub 2006 Nov 14. PMID:17105754

  • Li J, Leung FC. A CR1 element is embedded in a novel tandem repeat (HinfI repeat) within the chicken genome. Genome. 2006 Feb;49(2):97-103. PMID:16498459

  • Wang Y, Leung FC. Long inverted repeats in eukaryotic genomes: recombinogenic motifs determine genomic plasticity. FEBS Lett. 2006 Feb 20;580(5):1277-84. Epub 2006 Jan 26. PMID:16466723

  • Wang Y, Rocha EP, Leung FC, Danchin A. Cytosine methylation is not the major factor inducing CpG dinucleotide deficiency in bacterial genomes. J Mol Evol. 2004 Jun;58(6):692-700. PMID:15461426

  • Wang Y, Leung FC. DNA structure constraint is probably a fundamental factor inducing CpG deficiency in bacteria. Bioinformatics. 2004 Dec 12;20(18):3336-45. Epub 2004 Jul 9. Erratum in: Bioinformatics. 2005 Feb 1;21(3):421. PMID:15247101

  • Wang Y, Leung FC. An evaluation of new criteria for CpG islands in the human genome as gene markers. Bioinformatics. 2004 May 1;20(7):1170-7. Epub 2004 Feb 5. PMID:14764558

  • Zhang X, Leung FC, Chan DK, Yang G, Wu C. Genetic diversity of Chinese native chicken breeds based on protein polymorphism, randomly amplified polymorphic DNA, and microsatellite polymorphism. Poult Sci. 2002 Oct;81(10):1463-72. PMID:12412910

  • Zhang X, Leung FC, Chan DK, Chen Y, Wu C. Comparative analysis of allozyme, random amplified polymorphic DNA, and microsatellite polymorphism on Chinese native chickens. Poult Sci. 2002 Aug;81(8):1093-8. PMID:12211297

  • Wang X, Li J, Leung FC. Partially inverted tandem repeat isolated from pericentric region of chicken chromosome 8. Chromosome Res. 2002;10(1):73-82. PMID:11863074

  • Ho IS, Leung FC. Isolation and characterization of repetitive DNA sequences from Panax ginseng. Mol Genet Genomics. 2002 Feb;266(6):951-61. Epub 2001 Dec 19. PMID:11862489

  • Wang Y, Guo Y, Shen X, Leung FC. [DNA polymorphism in the genomes of different Escherichia coli strains]. Wei Sheng Wu Xue Bao. 1997 Dec;37(6):455-62. Chinese. PMID:11189378

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